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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

JMJD7-PLA2G4B Gene

protein-coding   GIFtS: 51
GCID: GC15P042122

JMJD7-PLA2G4B readthrough

 Explore 5 diseases affiliated with
JMJD7-PLA2G4B via our new
 Human Malady Compendium 
Biological research products
for JMJD7-PLA2G4B
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
JMJD7-PLA2G4B Readthrough1 2     JMJD7-PLA2G4B Protein2
CPLA2-Beta1     Jumonji Domain Containing 7-Phospholipase A2, Group IVB (Cytosolic)
Read-Through2
EC 3.1.1.43 8     Phospholipase A2 Group IVB3
HsT169922     

External Ids:    HGNC: 344491   Entrez Gene: 86812   Ensembl: ENSG000001689707   UniProtKB: P0C8693   

Export aliases for JMJD7-PLA2G4B gene to outside databases

Previous GC identifers: GC15P039910 GC15P018968


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for JMJD7-PLA2G4B:
This gene transcribes naturally-occurring mRNAs that are read-through products of the neighboring jumonji domain
containing 7 (JMJD7) and phospholipase A2, group IVB (PLA2G4B) genes. These read-through products contain in-frame
segments from both genes but a function has yet to be determined for the predicted fusion proteins, which contain a
partial JmjC domain and downstream C2 and phospholipase A2 domains. Alternatively spliced transcript variants have
been observed for this gene. (provided by RefSeq, Sep 2011)

UniProtKB/Swiss-Prot: PA24B_HUMAN, P0C869
Function: Calcium-dependent phospholipase A2 that selectively hydrolyzes glycerophospholipids in the sn-2 position with
a preference for arachidonoyl phospholipids. Has a much weaker activity than PLA2G4A. Isoform 3 has calcium-dependent
activity against palmitoyl-arachidonyl-phosphatidylethanolamine and low level lysophospholipase activity but no
activity against phosphatidylcholine. Isoform 5 does have activity against phosphatidylcholine

Gene Wiki entry for JMJD7-PLA2G4B (PLA2G4B)


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000015.9  NC_018926.1  NT_010194.17  
Regulatory elements:
   Search SABiosciences Regulatory transcription factor binding sites for JMJD7-PLA2G4B
         Other transcription factors

Browse SwitchGear Promoter luciferase reporter plasmids
   Search SABiosciences Chromatin IP Primers for JMJD7-PLA2G4B

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat JMJD7-PLA2G4B


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 15q11.2-q21.3   Ensembl cytogenetic band:  15q15.1   HGNC cytogenetic band: 15q11.2-q21.3

JMJD7-PLA2G4B Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
JMJD7-PLA2G4B gene location

GeneLoc information about chromosome 15         GeneLoc Exon Structure

GeneLoc location for GC15P042122:  view genomic region     (about GC identifiers)

Start:
42,120,283 bp from pter      End:
42,140,353 bp from pter
Size:
20,071 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: PA24B_HUMAN, P0C869 (See protein sequence)
Recommended Name: Cytosolic phospholipase A2 beta  
Size: 781 amino acids; 87978 Da
Subcellular location: Cytoplasm, cytosol
Subcellular location: Isoform 3: Mitochondrion membrane; Peripheral membrane protein. Early endosome membrane;
Peripheral membrane protein. Note=Translocates to membrane vesicles in a calcium-dependent fashion
Caution: Most tissues also express read-through transcripts from this gene into the upstream gene (JMJD7), some of
which may encode fusion proteins
Sequence caution: Sequence=BAD92387.1; Type=Erroneous initiation; Note=Translation N-terminally shortened;
Secondary accessions: B4DRT9 O95712 Q19KD5 Q19KD6 Q59GF9 Q8TB10 Q9UKV7
Alternative splicing: 5 isoforms:  P0C869-1, O95712-1   P0C869-7   P0C869-8   P0C869-4, O95712-4   P0C869-6   (Based on a naturally occurring readthrough transcript which produces a JMJD7-PLA2G4B fusion protein)

Explore the universe of human proteins at neXtProt for JMJD7-PLA2G4B: NX_P0C869

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_P0C869

  • 2 DME Specific Peptides for JMJD7-PLA2G4B (P0C869)
     RAMTSLYG  EFSPYEVG 

    JMJD7-PLA2G4B Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins (2 alternative transcripts): 
    NP_001185517.1  NP_005081.1  

    ENSEMBL proteins: 
     ENSP00000371886   ENSP00000342785   ENSP00000424127   ENSP00000441905   ENSP00000416610  
    Reactome Protein details: P0C869
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    Browse Proteins at Uscn

    Gene Ontology (GO): 4 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005576extracellular region ----
    GO:0005829cytosol ----
    GO:0031901early endosome membrane ----
    GO:0031966mitochondrial membrane ----


    JMJD7-PLA2G4B for ontologies           About GeneDecksing



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    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    JMJD7-PLA2G4B for domains           About GeneDecksing

    5 InterPro domains/families:
     IPR016035 Acyl_Trfase/lysoPLipase
     IPR008973 C2_Ca/lipid-bd_dom_CaLB
     IPR002642 LysoPLipase_cat_dom
     IPR018029 C2_membr_targeting
     IPR000008 C2_Ca-dep

    Graphical View of Domain Structure for InterPro Entry P0C869

    ProtoNet protein and cluster: P0C869

    UniProtKB/Swiss-Prot: PA24B_HUMAN, P0C869
    Domain: The N-terminal C2 domain associates with lipid membranes upon calcium binding. It modulates enzyme activity by
    presenting the active site to its substrate in response to elevations of cytosolic Ca(2+) (By similarity)
    Similarity: Contains 1 C2 domain
    Similarity: Contains 1 PLA2c domain


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: PA24B_HUMAN, P0C869
    Function: Calcium-dependent phospholipase A2 that selectively hydrolyzes glycerophospholipids in the sn-2 position with
    a preference for arachidonoyl phospholipids. Has a much weaker activity than PLA2G4A. Isoform 3 has calcium-dependent
    activity against palmitoyl-arachidonyl-phosphatidylethanolamine and low level lysophospholipase activity but no
    activity against phosphatidylcholine. Isoform 5 does have activity against phosphatidylcholine
    Catalytic activity: Phosphatidylcholine + H(2)O = 1-acylglycerophosphocholine + a carboxylate
    Enzyme regulation: Stimulated by cytosolic Ca(2+)
    Biophysicochemical properties: Kinetic parameters: Vmax=7.9 pmol/min/mg enzyme (isoform 5); Vmax=3.6 pmol/min/ug enzyme
    with cAMP as substrate (isoform 4); Vmax=140 nmol/min/ug enzyme with 1-[14C]16:0-2-lyso-PC as substrate (isoform 5);
    Vmax=1.6 nmol/min/ug enzyme with 1-[14C]16:0-2-lyso-PC as substrate (isoform 3); Vmax=2.1 nmol/min/ug enzyme with
    1-16:0-2-[14C]20:4-PC as substrate (isoform 5); Vmax=0.6 nmol/min/ug enzyme with 1-16:0-2-[14C]20:4-PE as substrate
    (isoform 5); Vmax=0.8 nmol/min/ug enzyme with 1-16:0-2-[14C]20:4-PE as substrate (isoform 3); Vmax=0.3 nmol/min/ug
    enzyme with 1-16:0-2-[14C]18:2-PE as substrate (isoform 3);

    Enzyme Number (IUBMB): EC 3.1.1.41 2

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    Gene Ontology (GO): 4 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004622lysophospholipase activity ----
    GO:0005509calcium ion binding ----
    GO:0005544calcium-dependent phospholipid binding ----
    GO:0047498calcium-dependent phospholipase A2 activity ----


    JMJD7-PLA2G4B for ontologies           About GeneDecksing


    1 GenomeRNAi human phenotype for JMJD7-PLA2G4B:
     Increased gamma-H2AX phosphory 


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/11 super-pathways (see all 11About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1alpha-Linolenic acid metabolism
    alpha-Linolenic acid metabolism1.00
    Ether lipid metabolism0.44
    Linoleic acid metabolism0.52
    Fat digestion and absorption0.32
    2GnRH signaling pathway
    GnRH signaling pathway1.00
    Vascular smooth muscle contraction0.36
    3VEGF signaling pathway
    VEGF signaling pathway1.00
    Fc epsilon RI signaling pathway0.42
    4Pancreatic secretion
    Pancreatic secretion1.00
    5Long-term depression
    Long-term depression1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways


    5/15        Reactome Pathways for JMJD7-PLA2G4B (see all 15)
        Acyl chain remodelling of PE
    Synthesis of PA
    Metabolism
    Acyl chain remodelling of PC
    Acyl chain remodelling of PG


    5/16         Kegg Pathways  (Kegg details for JMJD7-PLA2G4B) (see all 16):
        Glycerophospholipid metabolism
    Ether lipid metabolism
    Arachidonic acid metabolism
    Linoleic acid metabolism
    alpha-Linolenic acid metabolism


    JMJD7-PLA2G4B for pathways           About GeneDecksing

    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for JMJD7-PLA2G4B

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/69 Interacting proteins for JMJD7-PLA2G4B (P0C8693 ENSP000003718864) via UniProtKB, MINT, STRING, and/or I2D (see all 69)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    SHBGP042783, ENSP000003698164I2D: score=2 STRING: ENSP00000369816
    LYPLA1ENSP000003200434STRING: ENSP00000320043
    PLA2G7ENSP000002747934STRING: ENSP00000274793
    PLB1ENSP000003304424STRING: ENSP00000330442
    PTGS1ENSP000003546124STRING: ENSP00000354612
    About this table

    Gene Ontology (GO): 5/7 biological process terms (GO ID links to tree view) (see all 7):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006954inflammatory response ----
    GO:0006987activation of signaling protein activity involved in unfolded protein response ----
    GO:0007567parturition ----
    GO:0019369arachidonic acid metabolic process ----
    GO:0019722calcium-mediated signaling ----


    JMJD7-PLA2G4B for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
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    Search CenterWatch for drugs/clinical trials and news about JMJD7-PLA2G4B / PA24B 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for JMJD7-PLA2G4B gene (2 alternative transcripts): 
    NM_001198588.1  NM_005090.3  

    Unigene Cluster for JMJD7-PLA2G4B:

    JMJD7-PLA2G4B readthrough
    Hs.198161  [show with all ESTs]
    Unigene Representative Sequence: BX648318
    8 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000490848(uc001zon.2 uc001zoo.4 uc010bcn.3 uc001zoq.4 uc010bco.3)
    ENST00000382448 ENST00000491746 ENST00000342159 ENST00000476036 ENST00000487292
    ENST00000542534 ENST00000458483

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    Additional cDNA sequence: 

    AK000550.1 AK000663.1 AK000814.1 AK225503.1 AK289833.1 AK290051.1 AK299419.1 BC025290.1 
    BC067834.1 BC110415.1 BC128426.1 BC139899.1 BX648318.1 

    18 DOTS entries:

    DT.97842266  DT.311958  DT.101984110  DT.95261647  DT.100778046  DT.95237468  DT.121643035  DT.95367714 
    DT.100684154  DT.95305313  DT.121078144  DT.97839699  DT.100024908  DT.100024910  DT.121078181  DT.40292354 
    DT.95257992  DT.97822446 

    24/147 AceView cDNA sequences (see all 147):

    BM712481 BI488527 AL134221 BM715074 BC013415 BM856492 BM018609 Z39200 
    CB306001 BM672804 CD106612 BI040640 AU106339 NM_005090 CA488226 BU556751 
    BM982475 AF065215 BU557386 BQ959906 CA313879 BI040647 BC025290 BP368732 

    GeneLoc Exon Structure

    5/20 Alternative Splicing Database (ASD) splice patterns (SP) for JMJD7-PLA2G4B (see all 20)    About this scheme

    ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5a · 5b · 5c · 5d · 5e ^ 6 ^ 7 ^ 8a · 8b · 8c ^ 9 ^ 10 ^ 11a · 11b · 11c · 11d ^ 12 ^ 13a · 13b ^ 14a · 14b ·
    SP1:              -     -                       -                             -                       -     -     -     -     -     -     -     -     -     -   
    SP2:                                                                                                                          -     -     -     -     -         
    SP3:              -                 -           -     -                       -                                                                                 
    SP4:              -     -                       -                             -                                                                                 
    SP5:                                                                                                                                                            

    ExUns: 14c ^ 15 ^ 16a · 16b · 16c · 16d ^ 17 ^ 18 ^ 19 ^ 20 ^ 21a · 21b ^ 22 ^ 23a · 23b ^ 24a · 24b ^ 25 ^ 26 ^ 27a · 27b ^ 28 ^ 29a · 29b ^ 30a · 30b ^
    SP1:                                                                    -           -     -     -                                         -                     
    SP2:                                                                    -     -     -     -     -                                         -                     
    SP3:                                                                                                                                                            
    SP4:                                                                                                                                                            
    SP5:                                                                                                                                      -                     

    ExUns: 31a · 31b ^ 32 ^ 33a · 33b
    SP1:                              
    SP2:                              
    SP3:                              
    SP4:                              
    SP5:  -                           


    ECgene alternative splicing isoforms for JMJD7-PLA2G4B

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    JMJD7-PLA2G4B expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: TTGAATAAAA

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See JMJD7-PLA2G4B Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for JMJD7-PLA2G4B

    SOURCE GeneReport for Unigene cluster: Hs.198161

    UniProtKB/Swiss-Prot: PA24B_HUMAN, P0C869
    Tissue specificity: Widely expressed. Expressed at higher level in brain, heart, liver, cerebellum and pancreas.
    Isoform 3 is widely expressed

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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for JMJD7-PLA2G4B

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of chordates.

    Orthologs for JMJD7-PLA2G4B gene from 3/6 species (see all 6)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves JMJD76
    PLA2G4E6
    Uncharacterized protein
    52(a)
    43(a)
    1 ↔ many
    possible ortholog
    5(27300442-27359905)
    5(27675765-27690864)
    lizard
    (Anolis carolinensis)
    Reptilia --
    --
    --
    46(a)
    42(a)
    1 ↔ many
    possible ortholog
    1(40700407-40743498)
    1(40793049-40829512)
    zebrafish
    (Danio rerio)
    Actinopterygii BX927351.26
    BX927351.16
    --
    34(a)
    33(a)
    many ↔ many
    many ↔ many
    17(21312011-21323974)
    17(21283452-21297200)


    ENSEMBL Gene Tree for JMJD7-PLA2G4B (if available)
    TreeFam Gene Tree for JMJD7-PLA2G4B (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for JMJD7-PLA2G4B gene
    PLA2G4A2  PLA2G4D2  PLA2G4B2  PLA2G4F2  PLA2G4E2  PLA2G4C2  
    2 SIMAP similar genes for JMJD7-PLA2G4B using alignment to 1 protein entry:     H0Y9G9_HUMAN:
    JMJD7    HIF1AN

    JMJD7-PLA2G4B for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/433 NCBI SNPs in JMJD7-PLA2G4B are shown (see all 433    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 15 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs37430251,2
    C,H--18967006(-) ATGTGT/GGCACG 2 -- us2k18Minor allele frequency- G:0.00EA NA NS 2034
    rs610461091,2
    F,--18967071(+) ATCTGG/ACTGGC 2 -- us2k11Minor allele frequency- A:0.07WA 118
    rs80395611,2
    C,F,H,--18967220(+) TGATAC/TGAGAT 2 -- us2k15Minor allele frequency- T:0.01NS EA WA 496
    rs1141183411,2
    C,F,--18967372(+) GGTAAG/ATGGCA 2 -- us2k11Minor allele frequency- A:0.02WA 118
    rs49239141,2
    C,F,A,H,--18967992(+) AGCATC/TGCYAC 2 -- us2k18Minor allele frequency- T:0.22NS EA NA 654
    rs49239151,2
    C,A,--18967995(+) ATYGCC/TACCCG 2 -- us2k13Minor allele frequency- T:0.30NA EA 242
    rs1142610071,2
    C,F,--18968129(+) AGGAGG/AGAGCT 2 -- us2k11Minor allele frequency- A:0.02WA 118
    rs22775341,2
    C,F,H,--18968226(-) GGGACG/AGGGCG 2 -- us2k14Minor allele frequency- A:0.01NS EA 416
    rs80257141,2
    C,F,--18968546(+) ggcggG/Cgtgct 2 -- us2k15Minor allele frequency- C:0.49NA EA 246
    rs133803151,2
    C,F,--18968826(+) NNNNCC/GTGGGA 2 -- int18Minor allele frequency- G:0.33NA WA CSA EA 368

    HapMap Linkage Disequilibrium report for JMJD7-PLA2G4B (42120283 - 42140353 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 3 variations for JMJD7-PLA2G4B
         3 CNVs: 49553 3078 30707

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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    JMJD7-PLA2G4B for disorders           About GeneDecksing

    5 diseases for JMJD7-PLA2G4B:    About MalaCards
    toxoplasmosis    schizophrenia    pancreatitis    prostatitis
    neuronitis

    Human Genome Epidemiology (HuGE) Navigator: JMJD7-PLA2G4B (0 documents)

    Export disorders for JMJD7-PLA2G4B gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for JMJD7-PLA2G4B gene, integrated from 9 sources (see all 20):
    (articles sorted by number of sources associating them with JMJD7-PLA2G4B)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Identification of the expressed form of human cytosolic phospholipase A2beta (cPLA2beta): cPLA2beta3 is a novel variant localized to mitochondria and early endosomes. (PubMed id 16617059)1, 2, 9 Ghosh M.... Leslie C.C. (2006)
    2. Molecular cloning of two new human paralogs of 85-kDa cytosolic phospholipase A2. (PubMed id 10085124)1, 2 Pickard R.T.... Sharp J.D. (1999)
    3. Molecular characterization of cytosolic phospholipase A2-beta. (PubMed id 10358058)1, 2 Song C.... Kriz R.W. (1999)
    4. Expression of conjoined genes: another mechanism for gene regulation in eukaryotes. (PubMed id 20967262)1 Prakash T....Taylor T.D. (2010)
    5. Variation at the NFATC2 locus increases the risk of t hiazolidinedione-induced edema in the Diabetes REduction Assessment with ramipr il and rosiglitazone Medication (DREAM) study. (PubMed id 20628086)1 Bailey S.D....Anand S. (2010)
    6. Gene-centric association signals for lipids and apoli poproteins identified via the HumanCVD BeadChip. (PubMed id 19913121)1 Talmud P.J.... . (2009)
    7. Analysis of the DNA sequence and duplication history of human chromosome 15. (PubMed id 16572171)2 Zody M.C....Nusbaum C. (2006)
    8. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PubMed id 16344560)1 Kimura K.... Sugano S. (2006)
    9. Cytosolic PLA2 genes possibly contribute to the etiology of schizophrenia. (PubMed id 15999343)1 Tao R....Wei J. (2005)
    10. Yeast two-hybrid identification of prostatic proteins interacting with human sex hormone-binding globulin. (PubMed id 15862967)1 Pope S.N. and Lee I.R. (2005)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 8681 HGNC: 34449 AceView: PLA2G4B Ensembl:ENSG00000168970 euGenes: HUgn8681
    ECgene: JMJD7-PLA2G4B Kegg: 8681 H-InvDB: JMJD7-PLA2G4B

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for JMJD7-PLA2G4B Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for JMJD7-PLA2G4B gene:
    Search GeneIP for patents involving JMJD7-PLA2G4B

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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